IL_8ZGY_051

3D structure

PDB id

8ZGY (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with P/E tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UCUAGACAG*CCGAA

Length

14 nucleotides

Bulged bases

8ZGY|1|LA|A|1220

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZGY|1|LA|U|1217
8ZGY|1|LA|C|1218
8ZGY|1|LA|U|1219
8ZGY|1|LA|A|1220
8ZGY|1|LA|G|1221
8ZGY|1|LA|A|1222
8ZGY|1|LA|C|1223
8ZGY|1|LA|A|1224
8ZGY|1|LA|G|1225
*
8ZGY|1|LA|C|1282
8ZGY|1|LA|C|1283
8ZGY|1|LA|G|1284
8ZGY|1|LA|A|1285
8ZGY|1|LA|A|1286

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains

Chain LU

Large ribosomal subunit protein eL20A

Chain Lo

Large ribosomal subunit protein eL40A