IL_9AXU_037
3D structure
- PDB id
- 9AXU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Non-translating S. pombe ribosome large subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.94 Å
Loop
- Sequence
- GAGGUAA*UAAAUAU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_94128.1
- Basepair signature
- cWW-cWW-L-R-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
9AXU|1|2|G|1023
9AXU|1|2|A|1024
9AXU|1|2|G|1025
9AXU|1|2|G|1026
9AXU|1|2|U|1027
9AXU|1|2|A|1028
9AXU|1|2|A|1029
*
9AXU|1|2|U|1084
9AXU|1|2|A|1085
9AXU|1|2|A|1086
9AXU|1|2|A|1087
9AXU|1|2|U|1088
9AXU|1|2|A|1089
9AXU|1|2|U|1090
Current chains
- Chain 2
- 28S ribosomal RNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain Q
- Large ribosomal subunit protein uL18B
- Chain S
- Large ribosomal subunit protein uL30C
- Chain V
- Large ribosomal subunit protein uL16A
- Chain e
- Large ribosomal subunit protein eL20A
- Chain f
- Large ribosomal subunit protein eL21B
- Chain n
- Large ribosomal subunit protein eL29
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