IL_9AXU_048
3D structure
- PDB id
- 9AXU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Non-translating S. pombe ribosome large subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.94 Å
Loop
- Sequence
- CUCAUCAG*CUUAAG
- Length
- 14 nucleotides
- Bulged bases
- 9AXU|1|2|U|1222, 9AXU|1|2|C|1223, 9AXU|1|2|U|1347, 9AXU|1|2|A|1349
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_39054.1
- Basepair signature
- cWW-tWW-L-tWW-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
9AXU|1|2|C|1218
9AXU|1|2|U|1219
9AXU|1|2|C|1220
9AXU|1|2|A|1221
9AXU|1|2|U|1222
9AXU|1|2|C|1223
9AXU|1|2|A|1224
9AXU|1|2|G|1225
*
9AXU|1|2|C|1345
9AXU|1|2|U|1346
9AXU|1|2|U|1347
9AXU|1|2|A|1348
9AXU|1|2|A|1349
9AXU|1|2|G|1350
Current chains
- Chain 2
- 28S ribosomal RNA
Nearby chains
- Chain U
- Large ribosomal subunit protein uL6B
- Chain Y
- Large ribosomal subunit protein eL14
- Chain a
- Large ribosomal subunit protein uL13A
- Chain e
- Large ribosomal subunit protein eL20A
Coloring options: