IL_9AXU_069
3D structure
- PDB id
- 9AXU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Non-translating S. pombe ribosome large subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.94 Å
Loop
- Sequence
- UGAAAUC*GGAGCUA
- Length
- 14 nucleotides
- Bulged bases
- 9AXU|1|2|U|1756, 9AXU|1|2|A|1769
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93476.1
- Basepair signature
- cWW-tSH-L-R-tSS-tHS-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
9AXU|1|2|U|1751
9AXU|1|2|G|1752
9AXU|1|2|A|1753
9AXU|1|2|A|1754
9AXU|1|2|A|1755
9AXU|1|2|U|1756
9AXU|1|2|C|1757
*
9AXU|1|2|G|1767
9AXU|1|2|G|1768
9AXU|1|2|A|1769
9AXU|1|2|G|1770
9AXU|1|2|C|1771
9AXU|1|2|U|1772
9AXU|1|2|A|1773
Current chains
- Chain 2
- 28S ribosomal RNA
Nearby chains
- Chain 1
- Large ribosomal subunit protein eL43A
- Chain d
- Large ribosomal subunit protein eL19B
- Chain l
- Large ribosomal subunit protein eL27A
- Chain o
- Large ribosomal subunit protein eL30A
- Chain s
- Large ribosomal subunit protein eL34B
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