IL_9AXU_120

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

GUA*UUAAGC

Length

9 nucleotides

Bulged bases

9AXU|1|2|G|3478

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_00086.1

Basepair signature

cWW-cWW-L-cWW-L

Number of instances in this motif group

4

Unit IDs

9AXU|1|2|G|3429
9AXU|1|2|U|3430
9AXU|1|2|A|3431
*
9AXU|1|2|U|3474
9AXU|1|2|U|3475
9AXU|1|2|A|3476
9AXU|1|2|A|3477
9AXU|1|2|G|3478
9AXU|1|2|C|3479

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain O

Large ribosomal subunit protein uL3A

Chain p

Large ribosomal subunit protein eL31