IL_9B0S_023

3D structure

PDB id

9B0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human top-top di-ribosome structure (Composite map)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

9B0S|1|L5|C|685, 9B0S|1|L5|U|687

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0S|1|L5|A|466
9B0S|1|L5|U|467
9B0S|1|L5|U|468
9B0S|1|L5|C|469
9B0S|1|L5|A|470
9B0S|1|L5|A|471
9B0S|1|L5|C|472
*
9B0S|1|L5|G|682
9B0S|1|L5|C|683
9B0S|1|L5|G|684
9B0S|1|L5|C|685
9B0S|1|L5|A|686
9B0S|1|L5|U|687
9B0S|1|L5|U|688
9B0S|1|L5|U|689

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LE

Large ribosomal subunit protein eL6

Chain Lr

60S ribosomal protein L28