IL_9B0S_103

3D structure

PDB id

9B0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human top-top di-ribosome structure (Composite map)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CC*GUG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9B0S_103 not in the Motif Atlas

Homologous match to IL_8CRE_075

Geometric discrepancy: 0.1523

The information below is about IL_8CRE_075

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_90729.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

30

Unit IDs

9B0S|1|L5|C|2614
9B0S|1|L5|C|2615
*
9B0S|1|L5|G|2722
9B0S|1|L5|U|2723
9B0S|1|L5|G|2724

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LR

60S ribosomal protein L19

Chain Lg

60S ribosomal protein L34