IL_9B0S_428

3D structure

PDB id

9B0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human top-top di-ribosome structure (Composite map)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CAUUG*CCAAGCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0S|1|l5|C|4466
9B0S|1|l5|A|4467
9B0S|1|l5|U|4468
9B0S|1|l5|U|4469
9B0S|1|l5|G|4470
*
9B0S|1|l5|C|4485
9B0S|1|l5|C|4486
9B0S|1|l5|A|4487
9B0S|1|l5|A|4488
9B0S|1|l5|G|4489
9B0S|1|l5|C|4490
9B0S|1|l5|G|4491

Current chains

Chain l5

28S rRNA [Homo sapiens]

Nearby chains

Chain lB

Large ribosomal subunit protein uL3

Chain lH

60S ribosomal protein L9

Chain lO

60S ribosomal protein L13a

Chain lV

60S ribosomal protein L23

Chain lm

Large ribosomal subunit protein eL40