IL_9B24_043
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- GUUGC*GGACUC
- Length
- 11 nucleotides
- Bulged bases
- 9B24|1|A|U|1106
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_043 not in the Motif Atlas
- Homologous match to IL_5J7L_051
- Geometric discrepancy: 0.4699
- The information below is about IL_5J7L_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_06691.1
- Basepair signature
- cWW-cWS-L-R-L-R-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
9B24|1|A|G|1104
9B24|1|A|U|1105
9B24|1|A|U|1106
9B24|1|A|G|1107
9B24|1|A|C|1108
*
9B24|1|A|G|1125
9B24|1|A|G|1126
9B24|1|A|A|1127
9B24|1|A|C|1128
9B24|1|A|U|1129
9B24|1|A|C|1130
Current chains
- Chain A
- RNA (1528-MER)
Nearby chains
- Chain I
- Small ribosomal subunit protein uS9
- Chain J
- Small ribosomal subunit protein uS10
Coloring options: