IL_9B24_046
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- UACAAAG*UUUCAAAG
- Length
- 15 nucleotides
- Bulged bases
- 9B24|1|A|U|1266, 9B24|1|A|U|1267
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_046 not in the Motif Atlas
- Homologous match to IL_5J7L_054
- Geometric discrepancy: 0.4931
- The information below is about IL_5J7L_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09129.2
- Basepair signature
- cWW-L-R-tWH-L-R-L-tWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
9B24|1|A|U|1228
9B24|1|A|A|1229
9B24|1|A|C|1230
9B24|1|A|A|1231
9B24|1|A|A|1232
9B24|1|A|A|1233
9B24|1|A|G|1234
*
9B24|1|A|U|1265
9B24|1|A|U|1266
9B24|1|A|U|1267
9B24|1|A|C|1268
9B24|1|A|A|1269
9B24|1|A|A|1270
9B24|1|A|A|1271
9B24|1|A|G|1272
Current chains
- Chain A
- RNA (1528-MER)
Nearby chains
- Chain G
- Small ribosomal subunit protein uS7
- Chain I
- Small ribosomal subunit protein uS9
- Chain J
- Small ribosomal subunit protein uS10
- Chain N
- Small ribosomal subunit protein uS14B
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