IL_9B24_059
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- GUCCC*GAACC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_059 not in the Motif Atlas
- Homologous match to IL_9DFE_113
- Geometric discrepancy: 0.2035
- The information below is about IL_9DFE_113
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_58103.12
- Basepair signature
- cWW-cSH-cWS-L-tSW-R-R-cWW
- Number of instances in this motif group
- 12
Unit IDs
9B24|1|U|G|35
9B24|1|U|U|36
9B24|1|U|C|37
9B24|1|U|C|38
9B24|1|U|C|39
*
9B24|1|U|G|45
9B24|1|U|A|46
9B24|1|U|A|47
9B24|1|U|C|48
9B24|1|U|C|49
Current chains
- Chain U
- 5S rRNA
Nearby chains
- Chain Y
- Large subunit ribosomal RNA; LSU rRNA
- Chain c
- Large ribosomal subunit protein uL5
- Chain k
- Large ribosomal subunit protein uL18
Coloring options: