IL_9B24_063
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- GGGGAG*CGUUGAUCC
- Length
- 15 nucleotides
- Bulged bases
- 9B24|1|Y|U|98
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_063 not in the Motif Atlas
- Geometric match to IL_4LFB_031
- Geometric discrepancy: 0.2643
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
9B24|1|Y|G|77
9B24|1|Y|G|78
9B24|1|Y|G|79
9B24|1|Y|G|80
9B24|1|Y|A|81
9B24|1|Y|G|82
*
9B24|1|Y|C|95
9B24|1|Y|G|96
9B24|1|Y|U|97
9B24|1|Y|U|98
9B24|1|Y|G|99
9B24|1|Y|A|100
9B24|1|Y|U|101
9B24|1|Y|C|102
9B24|1|Y|C|103
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain q
- Large ribosomal subunit protein uL24
- Chain u
- Large ribosomal subunit protein uL29
Coloring options: