IL_9B24_066
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- UGAGUAG*CGAAAG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_066 not in the Motif Atlas
- Homologous match to IL_5J7L_251
- Geometric discrepancy: 0.1594
- The information below is about IL_5J7L_251
- Detailed Annotation
- 7x6 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_26307.2
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
9B24|1|Y|U|239
9B24|1|Y|G|240
9B24|1|Y|A|241
9B24|1|Y|G|242
9B24|1|Y|U|243
9B24|1|Y|A|244
9B24|1|Y|G|245
*
9B24|1|Y|C|253
9B24|1|Y|G|254
9B24|1|Y|A|255
9B24|1|Y|A|256
9B24|1|Y|A|257
9B24|1|Y|G|258
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain 1
- Large ribosomal subunit protein bL35
- Chain h
- Large ribosomal subunit protein uL15
Coloring options: