IL_9B24_079
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- GUGAAG*UGGAGGC
- Length
- 13 nucleotides
- Bulged bases
- 9B24|1|Y|G|844
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_079 not in the Motif Atlas
- Geometric match to IL_8C3A_507
- Geometric discrepancy: 0.3076
- The information below is about IL_8C3A_507
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85536.1
- Basepair signature
- cWW-tSH-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
9B24|1|Y|G|817
9B24|1|Y|U|818
9B24|1|Y|G|819
9B24|1|Y|A|820
9B24|1|Y|A|821
9B24|1|Y|G|822
*
9B24|1|Y|U|839
9B24|1|Y|G|840
9B24|1|Y|G|841
9B24|1|Y|A|842
9B24|1|Y|G|843
9B24|1|Y|G|844
9B24|1|Y|C|845
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain Z
- Large ribosomal subunit protein uL2
Coloring options: