IL_9B24_081
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 9B24|1|Y|G|891, 9B24|1|Y|A|903, 9B24|1|Y|A|904, 9B24|1|Y|U|905
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_081 not in the Motif Atlas
- Geometric match to IL_5J7L_265
- Geometric discrepancy: 0.118
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
9B24|1|Y|G|890
9B24|1|Y|G|891
9B24|1|Y|G|892
*
9B24|1|Y|C|902
9B24|1|Y|A|903
9B24|1|Y|A|904
9B24|1|Y|U|905
9B24|1|Y|C|906
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain Z
- Large ribosomal subunit protein uL2
- Chain b
- Large ribosomal subunit protein uL4
- Chain o
- Large ribosomal subunit protein uL22
- Chain z
- Large ribosomal subunit protein bL34
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