IL_9B24_094
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- CCCCUAAG*CG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_094 not in the Motif Atlas
- Homologous match to IL_4WF9_037
- Geometric discrepancy: 0.1377
- The information below is about IL_4WF9_037
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_11411.1
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 12
Unit IDs
9B24|1|Y|C|1122
9B24|1|Y|C|1123
9B24|1|Y|C|1124
9B24|1|Y|C|1125
9B24|1|Y|U|1126
9B24|1|Y|A|1127
9B24|1|Y|A|1128
9B24|1|Y|G|1129
*
9B24|1|Y|C|1269
9B24|1|Y|G|1270
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain f
- Large ribosomal subunit protein uL13
- Chain m
- Large ribosomal subunit protein bL20
Coloring options: