IL_9B24_099
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- CGAAGACAA*UCAAG
- Length
- 14 nucleotides
- Bulged bases
- 9B24|1|Y|A|1164
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_099 not in the Motif Atlas
- Homologous match to IL_5J7L_284
- Geometric discrepancy: 0.2295
- The information below is about IL_5J7L_284
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.2
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
9B24|1|Y|C|1161
9B24|1|Y|G|1162
9B24|1|Y|A|1163
9B24|1|Y|A|1164
9B24|1|Y|G|1165
9B24|1|Y|A|1166
9B24|1|Y|C|1167
9B24|1|Y|A|1168
9B24|1|Y|A|1169
*
9B24|1|Y|U|1226
9B24|1|Y|C|1227
9B24|1|Y|A|1228
9B24|1|Y|A|1229
9B24|1|Y|G|1230
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain d
- Large ribosomal subunit protein uL6
- Chain v
- Large ribosomal subunit protein uL10
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