IL_9B24_153
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- CCAAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_153 not in the Motif Atlas
- Homologous match to IL_7A0S_087
- Geometric discrepancy: 0.2817
- The information below is about IL_7A0S_087
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_87767.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
9B24|1|Y|C|2690
9B24|1|Y|C|2691
9B24|1|Y|A|2692
9B24|1|Y|A|2693
9B24|1|Y|G|2694
*
9B24|1|Y|C|2704
9B24|1|Y|G|2705
9B24|1|Y|A|2706
9B24|1|Y|C|2707
9B24|1|Y|G|2708
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L36
- Chain i
- Large ribosomal subunit protein uL16
Coloring options: