IL_9B24_167
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- UGGAAG*UGCAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_167 not in the Motif Atlas
- Homologous match to IL_4WF9_108
- Geometric discrepancy: 0.2422
- The information below is about IL_4WF9_108
- Detailed Annotation
- tHS double platform
- Broad Annotation
- No text annotation
- Motif group
- IL_48489.1
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
9B24|1|Y|U|3068
9B24|1|Y|G|3069
9B24|1|Y|G|3070
9B24|1|Y|A|3071
9B24|1|Y|A|3072
9B24|1|Y|G|3073
*
9B24|1|Y|U|3086
9B24|1|Y|G|3087
9B24|1|Y|C|3088
9B24|1|Y|A|3089
9B24|1|Y|G|3090
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain j
- Large ribosomal subunit protein bL17
- Chain l
- Large ribosomal subunit protein bL19
Coloring options: