IL_9B50_182
3D structure
- PDB id
- 9B50 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- ACCCC*GAACU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B50_182 not in the Motif Atlas
- Geometric match to IL_8B0X_174
- Geometric discrepancy: 0.1157
- The information below is about IL_8B0X_174
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_58103.12
- Basepair signature
- cWW-cSH-cWS-L-tSW-R-R-cWW
- Number of instances in this motif group
- 12
Unit IDs
9B50|1|BB|A|34
9B50|1|BB|C|35
9B50|1|BB|C|36
9B50|1|BB|C|37
9B50|1|BB|C|38
*
9B50|1|BB|G|44
9B50|1|BB|A|45
9B50|1|BB|A|46
9B50|1|BB|C|47
9B50|1|BB|U|48
Current chains
- Chain BB
- 5S ribosomal RNA
Nearby chains
- Chain B5
- 50S ribosomal protein L31
- Chain BA
- 23S ribosomal RNA
- Chain BF
- 50S ribosomal protein L5
- Chain BO
- 50S ribosomal protein L18
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