IL_9B50_183
3D structure
- PDB id
- 9B50 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CGAUGGUAG*CGAGAGUAG
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B50_183 not in the Motif Atlas
- Geometric match to IL_8B0X_175
- Geometric discrepancy: 0.0399
- The information below is about IL_8B0X_175
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_71138.1
- Basepair signature
- cWW-tSH-tHW-L-R-L-R-L-R-tWH-tHS-cWW
- Number of instances in this motif group
- 3
Unit IDs
9B50|1|BB|C|71
9B50|1|BB|G|72
9B50|1|BB|A|73
9B50|1|BB|U|74
9B50|1|BB|G|75
9B50|1|BB|G|76
9B50|1|BB|U|77
9B50|1|BB|A|78
9B50|1|BB|G|79
*
9B50|1|BB|C|97
9B50|1|BB|G|98
9B50|1|BB|A|99
9B50|1|BB|G|100
9B50|1|BB|A|101
9B50|1|BB|G|102
9B50|1|BB|U|103
9B50|1|BB|A|104
9B50|1|BB|G|105
Current chains
- Chain BB
- 5S ribosomal RNA
Nearby chains
- Chain BA
- 23S ribosomal RNA
- Chain BM
- 50S ribosomal protein L16
- Chain BV
- 50S ribosomal protein L25
Coloring options: