IL_9BDL_207
3D structure
- PDB id
- 9BDL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with angiogenin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CUGAAUG*CGCG
- Length
- 11 nucleotides
- Bulged bases
- 9BDL|1|A28S|A|3711
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BDL_207 not in the Motif Atlas
- Homologous match to IL_9PN5_084
- Geometric discrepancy: 0.4195
- The information below is about IL_9PN5_084
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89862.3
- Basepair signature
- cWW-L-tHS-L-R-L-cWW-L
- Number of instances in this motif group
- 8
Unit IDs
9BDL|1|A28S|C|3708
9BDL|1|A28S|U|3709
9BDL|1|A28S|G|3710
9BDL|1|A28S|A|3711
9BDL|1|A28S|A|3712
9BDL|1|A28S|U|3713
9BDL|1|A28S|G|3714
*
9BDL|1|A28S|C|3739
9BDL|1|A28S|G|3740
9BDL|1|A28S|C|3741
9BDL|1|A28S|G|3742
Current chains
- Chain A28S
- 28S rRNA
Nearby chains
- Chain A18S
- Small subunit ribosomal RNA; SSU rRNA
- Chain AL02
- 60S ribosomal protein L8
- Chain ETRN
- Transfer RNA; tRNA
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