IL_9BH5_148
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- GAUC*GGC
- Length
- 7 nucleotides
- Bulged bases
- 9BH5|1|A7|U|84
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BH5_148 not in the Motif Atlas
- Homologous match to IL_5TBW_378
- Geometric discrepancy: 0.1536
- The information below is about IL_5TBW_378
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
9BH5|1|A7|G|82
9BH5|1|A7|A|83
9BH5|1|A7|U|84
9BH5|1|A7|C|85
*
9BH5|1|A7|G|92
9BH5|1|A7|G|93
9BH5|1|A7|C|94
Current chains
- Chain A7
- 5S rRNA
Nearby chains
- Chain A5
- Large subunit ribosomal RNA; LSU rRNA
- Chain CF
- Large ribosomal subunit protein uL30
- Chain CI
- Large ribosomal subunit protein uL16
- Chain CS
- Large ribosomal subunit protein eL20
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