IL_9BH5_150
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- UAC*GUGA
- Length
- 7 nucleotides
- Bulged bases
- 9BH5|1|A8|G|93
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BH5_150 not in the Motif Atlas
- Geometric match to IL_5TBW_145
- Geometric discrepancy: 0.1731
- The information below is about IL_5TBW_145
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_54650.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
9BH5|1|A8|U|64
9BH5|1|A8|A|65
9BH5|1|A8|C|66
*
9BH5|1|A8|G|91
9BH5|1|A8|U|92
9BH5|1|A8|G|93
9BH5|1|A8|A|94
Current chains
- Chain A8
- 5.8S rRNA
Nearby chains
- Chain A5
- Large subunit ribosomal RNA; LSU rRNA
- Chain CY
- Large ribosomal subunit protein uL24
- Chain Ch
- Large ribosomal subunit protein uL29
- Chain Cj
- Ribosomal protein L37
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