IL_9BH5_157
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 9BH5|1|B2|U|154
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BH5_157 not in the Motif Atlas
- Homologous match to IL_8C3A_402
- Geometric discrepancy: 0.0947
- The information below is about IL_8C3A_402
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.4
- Basepair signature
- cWW-L-R-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
9BH5|1|B2|G|127
9BH5|1|B2|G|128
9BH5|1|B2|A|129
9BH5|1|B2|U|130
9BH5|1|B2|A|131
9BH5|1|B2|A|132
9BH5|1|B2|C|133
*
9BH5|1|B2|G|149
9BH5|1|B2|C|150
9BH5|1|B2|U|151
9BH5|1|B2|A|152
9BH5|1|B2|A|153
9BH5|1|B2|U|154
9BH5|1|B2|A|155
9BH5|1|B2|C|156
Current chains
- Chain B2
- 18S rRNA
Nearby chains
- Chain AG
- Small ribosomal subunit protein eS6
- Chain AY
- Small ribosomal subunit protein eS24
- Chain CW
- Large ribosomal subunit protein eL24
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