IL_9BH5_191
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- GUAGUAUG*UGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BH5_191 not in the Motif Atlas
- Homologous match to IL_4V88_440
- Geometric discrepancy: 0.0835
- The information below is about IL_4V88_440
- Detailed Annotation
- 8x6 Sarcin-Ricin with inserted Y; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_41756.1
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
9BH5|1|B2|G|1070
9BH5|1|B2|U|1071
9BH5|1|B2|A|1072
9BH5|1|B2|G|1073
9BH5|1|B2|U|1074
9BH5|1|B2|A|1075
9BH5|1|B2|U|1076
9BH5|1|B2|G|1077
*
9BH5|1|B2|U|1088
9BH5|1|B2|G|1089
9BH5|1|B2|A|1090
9BH5|1|B2|A|1091
9BH5|1|B2|A|1092
9BH5|1|B2|C|1093
Current chains
- Chain B2
- 18S rRNA
Nearby chains
- Chain AX
- Small ribosomal subunit protein uS12
- Chain Cn
- eL41
Coloring options: