IL_9BH5_211
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- GCCC*GUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BH5_211 not in the Motif Atlas
- Geometric match to IL_4V88_464
- Geometric discrepancy: 0.1101
- The information below is about IL_4V88_464
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65718.1
- Basepair signature
- cWW-cSH-cWS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
9BH5|1|B2|G|1594
9BH5|1|B2|C|1595
9BH5|1|B2|C|1596
9BH5|1|B2|C|1597
*
9BH5|1|B2|G|1714
9BH5|1|B2|U|1715
9BH5|1|B2|A|1716
9BH5|1|B2|A|1717
9BH5|1|B2|C|1718
Current chains
- Chain B2
- 18S rRNA
Nearby chains
- Chain A5
- Large subunit ribosomal RNA; LSU rRNA
- Chain Cn
- eL41
- Chain DA
- Transfer RNA; tRNA
- Chain DC
- mRNA
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