IL_9BS0_065
3D structure
- PDB id
- 9BS0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- YphC-treated 45SYphC particle. Class 5
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CGUAAC*GGAGAAG
- Length
- 13 nucleotides
- Bulged bases
- 9BS0|1|A|G|1744
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BS0_065 not in the Motif Atlas
- Homologous match to IL_7A0S_063
- Geometric discrepancy: 0.1378
- The information below is about IL_7A0S_063
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_20700.1
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 10
Unit IDs
9BS0|1|A|C|1731
9BS0|1|A|G|1732
9BS0|1|A|U|1733
9BS0|1|A|A|1734
9BS0|1|A|A|1735
9BS0|1|A|C|1736
*
9BS0|1|A|G|1741
9BS0|1|A|G|1742
9BS0|1|A|A|1743
9BS0|1|A|G|1744
9BS0|1|A|A|1745
9BS0|1|A|A|1746
9BS0|1|A|G|1747
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain C
- Large ribosomal subunit protein uL2
Coloring options: