IL_9BUP_203
3D structure
- PDB id
- 9BUP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Single particle CryoEM structure of the Pf80S ribosome in non-rotated PRE state (nrt A-P-E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CAU*AGGAAG
- Length
- 9 nucleotides
- Bulged bases
- 9BUP|1|SA|A|1636
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BUP_203 not in the Motif Atlas
- Geometric match to IL_8P9A_447
- Geometric discrepancy: 0.3293
- The information below is about IL_8P9A_447
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_94684.1
- Basepair signature
- cWW-tWH-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
9BUP|1|SA|C|1635
9BUP|1|SA|A|1636
9BUP|1|SA|U|1637
*
9BUP|1|SA|A|1653
9BUP|1|SA|G|1654
9BUP|1|SA|G|1655
9BUP|1|SA|A|1656
9BUP|1|SA|A|1657
9BUP|1|SA|G|1658
Current chains
- Chain SA
- 18S ribosomal RNA
Nearby chains
- Chain SI
- 40S ribosomal protein S5
- Chain SM
- 40S ribosomal protein S16
- Chain SW
- 40S ribosomal protein S17
Coloring options: