Motif IL_94684.1 Version IL_94684.1 of this group appears in releases 3.95 to 3.98
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 1-8 | 2-6 | 6-7 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8P9A_447 | 8P9A | 0.0000 | 1 | sR | SSU rRNA | U | 1407 | G | 1408 | G | 1409 | A | 1410 | A | 1411 | G | 1412 | * | C | 1389 | A | 1391 | cWW | tWH | cWW |
| 2 | IL_8CRE_461 | 8CRE | 0.3213 | 1 | CM | SSU rRNA | U | 1393 | G | 1394 | G | 1395 | A | 1396 | A | 1397 | G | 1398 | * | C | 1375 | A | 1377 | cWW | tWH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGGAAG*CUA | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGAA*U | 2 |
- Annotations
-
- (2)
- Basepair signature
- cWW-tWH-R-L-cWW-L-L
- Heat map statistics
- Min 0.32 | Avg 0.16 | Max 0.32
Coloring options: