IL_9C3H_023

3D structure

PDB id

9C3H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

9C3H|1|L5|U|467, 9C3H|1|L5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9C3H|1|L5|A|466
9C3H|1|L5|U|467
9C3H|1|L5|U|468
9C3H|1|L5|C|469
9C3H|1|L5|A|470
9C3H|1|L5|A|471
9C3H|1|L5|C|472
*
9C3H|1|L5|G|682
9C3H|1|L5|C|683
9C3H|1|L5|G|684
9C3H|1|L5|C|685
9C3H|1|L5|A|686
9C3H|1|L5|U|687
9C3H|1|L5|U|688
9C3H|1|L5|U|689

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LK

Large ribosomal subunit protein eL6

Chain Ll

Large ribosomal subunit protein eL28