IL_9C3H_098
3D structure
- PDB id
- 9C3H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2 Å
Loop
- Sequence
- AACAA(OMU)G*C(PSU)A(PSU)
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9C3H_098 not in the Motif Atlas
- Homologous match to IL_8P9A_302
- Geometric discrepancy: 0.0838
- The information below is about IL_8P9A_302
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89862.1
- Basepair signature
- cWW-L-tHS-L-R-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
9C3H|1|L5|A|2832
9C3H|1|L5|A|2833
9C3H|1|L5|C|2834
9C3H|1|L5|A|2835
9C3H|1|L5|A|2836
9C3H|1|L5|OMU|2837
9C3H|1|L5|G|2838
*
9C3H|1|L5|C|3850
9C3H|1|L5|PSU|3851
9C3H|1|L5|A|3852
9C3H|1|L5|PSU|3853
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LB
- Large ribosomal subunit protein uL3
- Chain Ld
- Large ribosomal subunit protein eL31
- Chain Lh
- Large ribosomal subunit protein uL22
Coloring options: