IL_9C3H_125
3D structure
- PDB id
- 9C3H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2 Å
Loop
- Sequence
- CAG*CGUGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9C3H_125 not in the Motif Atlas
- Homologous match to IL_8P9A_326
- Geometric discrepancy: 0.0748
- The information below is about IL_8P9A_326
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14250.1
- Basepair signature
- cWW-tSH-L-cWW-L
- Number of instances in this motif group
- 10
Unit IDs
9C3H|1|L5|C|4243
9C3H|1|L5|A|4244
9C3H|1|L5|G|4245
*
9C3H|1|L5|C|4263
9C3H|1|L5|G|4264
9C3H|1|L5|U|4265
9C3H|1|L5|G|4266
9C3H|1|L5|G|4267
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain L8
- Large ribosomal subunit protein uL18
- Chain L9
- 5S ribosomal RNA; 5S rRNA
- Chain LJ
- Large ribosomal subunit protein uL5
- Chain LT
- Large ribosomal subunit protein eL21
Coloring options: