IL_9C3H_203
3D structure
- PDB id
- 9C3H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2 Å
Loop
- Sequence
- GUGCCAG*CGG(OMU)AAUUC
- Length
- 16 nucleotides
- Bulged bases
- 9C3H|1|S2|A|628, 9C3H|1|S2|U|630, 9C3H|1|S2|U|631
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9C3H_203 not in the Motif Atlas
- Homologous match to IL_8P9A_404
- Geometric discrepancy: 0.1857
- The information below is about IL_8P9A_404
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_52042.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
9C3H|1|S2|G|611
9C3H|1|S2|U|612
9C3H|1|S2|G|613
9C3H|1|S2|C|614
9C3H|1|S2|C|615
9C3H|1|S2|A|616
9C3H|1|S2|G|617
*
9C3H|1|S2|C|624
9C3H|1|S2|G|625
9C3H|1|S2|G|626
9C3H|1|S2|OMU|627
9C3H|1|S2|A|628
9C3H|1|S2|A|629
9C3H|1|S2|U|630
9C3H|1|S2|U|631
9C3H|1|S2|C|632
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain S5
- mRNA
- Chain SK
- Small ribosomal subunit protein uS3
- Chain SX
- Small ribosomal subunit protein uS12
- Chain Se
- FAU ubiquitin-like and ribosomal protein S30
Coloring options: