IL_9C3H_216
3D structure
- PDB id
- 9C3H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2 Å
Loop
- Sequence
- GGCC*GAAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9C3H_216 not in the Motif Atlas
- Homologous match to IL_8P9A_419
- Geometric discrepancy: 0.0706
- The information below is about IL_8P9A_419
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 39
Unit IDs
9C3H|1|S2|G|928
9C3H|1|S2|G|929
9C3H|1|S2|C|930
9C3H|1|S2|C|931
*
9C3H|1|S2|G|1010
9C3H|1|S2|A|1011
9C3H|1|S2|A|1012
9C3H|1|S2|U|1013
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain Lc
- Large ribosomal subunit protein eL30
- Chain S1
- Small ribosomal subunit protein eS1
- Chain SN
- Small ribosomal subunit protein uS15
- Chain Sb
- Small ribosomal subunit protein eS27
Coloring options: