IL_9D7T_332
3D structure
- PDB id
- 9D7T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with Api137 antimicrobial peptide, mRNA, A-site release factor 1, and deacylated P-site and E-site tRNAphe at 2.70A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- UACAAAG*CAAAAAG
- Length
- 14 nucleotides
- Bulged bases
- 9D7T|1|2a|A|1286
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9D7T_332 not in the Motif Atlas
- Homologous match to IL_6CZR_160
- Geometric discrepancy: 0.1902
- The information below is about IL_6CZR_160
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09129.1
- Basepair signature
- cWW-tWH-tWH-L-R-L-R-tWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
9D7T|1|2a|U|1247
9D7T|1|2a|A|1248
9D7T|1|2a|C|1249
9D7T|1|2a|A|1250
9D7T|1|2a|A|1251
9D7T|1|2a|A|1252
9D7T|1|2a|G|1253
*
9D7T|1|2a|C|1284
9D7T|1|2a|A|1285
9D7T|1|2a|A|1286
9D7T|1|2a|A|1287
9D7T|1|2a|A|1288
9D7T|1|2a|A|1289
9D7T|1|2a|G|1290
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2g
- 30S ribosomal protein S7
- Chain 2i
- 30S ribosomal protein S9
- Chain 2j
- 30S ribosomal protein S10
- Chain 2n
- 30S ribosomal protein S14 type Z
- Chain 2u
- 30S ribosomal protein Thx
Coloring options: