IL_9E0N_103

3D structure

PDB id

9E0N (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis unmethylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.24 Å

Loop

Sequence

CG*CACG

Length

6 nucleotides

Bulged bases

9E0N|1|A|A|2796, 9E0N|1|A|C|2797

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9E0N_103 not in the Motif Atlas

Geometric match to IL_9DFE_098

Geometric discrepancy: 0.1121

The information below is about IL_9DFE_098

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_44609.2

Basepair signature

cWW-cWW

Number of instances in this motif group

24

Unit IDs

9E0N|1|A|C|2736
9E0N|1|A|G|2737
*
9E0N|1|A|C|2795
9E0N|1|A|A|2796
9E0N|1|A|C|2797
9E0N|1|A|G|2798

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

Large ribosomal subunit protein uL3

Chain K

Large ribosomal subunit protein uL13