IL_9E0N_116

3D structure

PDB id

9E0N (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis unmethylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.24 Å

Loop

Sequence

UACG*CCGA

Length

8 nucleotides

Bulged bases

9E0N|1|B|A|4

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9E0N_116 not in the Motif Atlas

Geometric match to IL_8GLP_064

Geometric discrepancy: 0.3313

The information below is about IL_8GLP_064

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_16315.2

Basepair signature

cWW-cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

9E0N|1|B|U|3
9E0N|1|B|A|4
9E0N|1|B|C|5
9E0N|1|B|G|6
*
9E0N|1|B|C|111
9E0N|1|B|C|112
9E0N|1|B|G|113
9E0N|1|B|A|114

Current chains

Chain B

5S rRNA

Nearby chains

Chain P

Large ribosomal subunit protein uL18