IL_9E0N_151
3D structure
- PDB id
- 9E0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis unmethylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.24 Å
Loop
- Sequence
- UGUAG*CGCAGAUA
- Length
- 13 nucleotides
- Bulged bases
- 9E0N|1|a|A|682
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E0N_151 not in the Motif Atlas
- Geometric match to IL_4V9F_031
- Geometric discrepancy: 0.3721
- The information below is about IL_4V9F_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_94910.1
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
9E0N|1|a|U|664
9E0N|1|a|G|665
9E0N|1|a|U|666
9E0N|1|a|A|667
9E0N|1|a|G|668
*
9E0N|1|a|C|679
9E0N|1|a|G|680
9E0N|1|a|C|681
9E0N|1|a|A|682
9E0N|1|a|G|683
9E0N|1|a|A|684
9E0N|1|a|U|685
9E0N|1|a|A|686
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain k
- Small ribosomal subunit protein uS11
Coloring options: