IL_9E0N_156

3D structure

PDB id

9E0N (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis unmethylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.24 Å

Loop

Sequence

UU*GGA

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9E0N_156 not in the Motif Atlas

Geometric match to IL_7KGA_003

Geometric discrepancy: 0.2322

The information below is about IL_7KGA_003

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_90729.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

30

Unit IDs

9E0N|1|a|U|818
9E0N|1|a|U|819
*
9E0N|1|a|G|829
9E0N|1|a|G|830
9E0N|1|a|A|831

Current chains

Chain a

16S rRNA

Nearby chains

Chain b

Small ribosomal subunit protein uS2

Chain r

Small ribosomal subunit protein bS18B