IL_9E0N_160

3D structure

PDB id

9E0N (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis unmethylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.24 Å

Loop

Sequence

GUGG*CAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9E0N_160 not in the Motif Atlas

Geometric match to IL_4PDQ_003

Geometric discrepancy: 0.3741

The information below is about IL_4PDQ_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_41344.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

9E0N|1|a|G|933
9E0N|1|a|U|934
9E0N|1|a|G|935
9E0N|1|a|G|936
*
9E0N|1|a|C|1209
9E0N|1|a|A|1210
9E0N|1|a|C|1211

Current chains

Chain a

16S rRNA

Nearby chains

Chain i

Small ribosomal subunit protein uS9

Chain m

Small ribosomal subunit protein uS13