IL_9E0P_044
3D structure
- PDB id
- 9E0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis methylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- GUUG*CACC
- Length
- 8 nucleotides
- Bulged bases
- 9E0P|1|A|U|1179
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E0P_044 not in the Motif Atlas
- Geometric match to IL_4V9F_110
- Geometric discrepancy: 0.1952
- The information below is about IL_4V9F_110
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28482.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
9E0P|1|A|G|1177
9E0P|1|A|U|1178
9E0P|1|A|U|1179
9E0P|1|A|G|1180
*
9E0P|1|A|C|1194
9E0P|1|A|A|1195
9E0P|1|A|C|1196
9E0P|1|A|C|1197
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain I
- Large ribosomal subunit protein uL10
- Chain J
- Large ribosomal subunit protein uL11
- Chain N
- Large ribosomal subunit protein uL16
- Chain W
- Large ribosomal subunit protein bL25
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