IL_9E0P_061

3D structure

PDB id

9E0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis methylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

GUAG*UGAUC

Length

9 nucleotides

Bulged bases

9E0P|1|A|U|1774

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9E0P_061 not in the Motif Atlas

Geometric match to IL_9DFE_056

Geometric discrepancy: 0.1608

The information below is about IL_9DFE_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

9E0P|1|A|G|1658
9E0P|1|A|U|1659
9E0P|1|A|A|1660
9E0P|1|A|G|1661
*
9E0P|1|A|U|1771
9E0P|1|A|G|1772
9E0P|1|A|A|1773
9E0P|1|A|U|1774
9E0P|1|A|C|1775

Current chains

Chain A

23S rRNA

Nearby chains