IL_9E0P_062

3D structure

PDB id

9E0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis methylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

UAAG*UGAUG

Length

9 nucleotides

Bulged bases

9E0P|1|A|U|1745

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9E0P_062 not in the Motif Atlas

Geometric match to IL_5J7L_299

Geometric discrepancy: 0.1775

The information below is about IL_5J7L_299

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.4

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

9E0P|1|A|U|1689
9E0P|1|A|A|1690
9E0P|1|A|A|1691
9E0P|1|A|G|1692
*
9E0P|1|A|U|1742
9E0P|1|A|G|1743
9E0P|1|A|A|1744
9E0P|1|A|U|1745
9E0P|1|A|G|1746

Current chains

Chain A

23S rRNA

Nearby chains