IL_9E0P_108
3D structure
- PDB id
- 9E0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis methylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- UUGAG*CAAGACCAG
- Length
- 14 nucleotides
- Bulged bases
- 9E0P|1|A|C|3004
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E0P_108 not in the Motif Atlas
- Geometric match to IL_9DFE_101
- Geometric discrepancy: 0.1917
- The information below is about IL_9DFE_101
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04638.4
- Basepair signature
- cWW-tSH-tHW-tHS-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
9E0P|1|A|U|2860
9E0P|1|A|U|2861
9E0P|1|A|G|2862
9E0P|1|A|A|2863
9E0P|1|A|G|2864
*
9E0P|1|A|C|2998
9E0P|1|A|A|2999
9E0P|1|A|A|3000
9E0P|1|A|G|3001
9E0P|1|A|A|3002
9E0P|1|A|C|3003
9E0P|1|A|C|3004
9E0P|1|A|A|3005
9E0P|1|A|G|3006
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain D
- Large ribosomal subunit protein uL3
- Chain K
- Large ribosomal subunit protein uL13
Coloring options: