IL_9E0P_181
3D structure
- PDB id
- 9E0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis methylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- CCGAAG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E0P_181 not in the Motif Atlas
- Geometric match to IL_8GLP_051
- Geometric discrepancy: 0.1798
- The information below is about IL_8GLP_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47352.2
- Basepair signature
- cWW-cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
9E0P|1|a|C|1413
9E0P|1|a|C|1414
9E0P|1|a|G|1415
9E0P|1|a|A|1416
9E0P|1|a|A|1417
9E0P|1|a|G|1418
*
9E0P|1|a|C|1450
9E0P|1|a|G|1451
9E0P|1|a|A|1452
9E0P|1|a|A|1453
9E0P|1|a|G|1454
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain L
- Large ribosomal subunit protein uL14
- Chain Q
- Large ribosomal subunit protein bL19
- Chain t
- Small ribosomal subunit protein bS20
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