IL_9E16_010
3D structure
- PDB id
- 9E16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGGAG*CGUGGAUC
- Length
- 13 nucleotides
- Bulged bases
- 9E16|1|I|G|101
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E16_010 not in the Motif Atlas
- Geometric match to IL_6UFG_001
- Geometric discrepancy: 0.1247
- The information below is about IL_6UFG_001
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_71972.2
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
9E16|1|I|G|81
9E16|1|I|G|82
9E16|1|I|G|83
9E16|1|I|A|84
9E16|1|I|G|85
*
9E16|1|I|C|98
9E16|1|I|G|99
9E16|1|I|U|100
9E16|1|I|G|101
9E16|1|I|G|102
9E16|1|I|A|103
9E16|1|I|U|104
9E16|1|I|C|105
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain U
- 50S ribosomal protein L24
- Chain Y
- 50S ribosomal protein L29
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