IL_9E16_029
3D structure
- PDB id
- 9E16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAAGC*GUGAUAGC
- Length
- 13 nucleotides
- Bulged bases
- 9E16|1|I|G|930, 9E16|1|I|G|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E16_029 not in the Motif Atlas
- Homologous match to IL_8B0X_080
- Geometric discrepancy: 0.1336
- The information below is about IL_8B0X_080
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73855.3
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
9E16|1|I|G|803
9E16|1|I|A|804
9E16|1|I|A|805
9E16|1|I|G|806
9E16|1|I|C|807
*
9E16|1|I|G|928
9E16|1|I|U|929
9E16|1|I|G|930
9E16|1|I|A|931
9E16|1|I|U|932
9E16|1|I|A|933
9E16|1|I|G|934
9E16|1|I|C|935
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
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