IL_9E16_047
3D structure
- PDB id
- 9E16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUAAGUG*CUCAAG
- Length
- 13 nucleotides
- Bulged bases
- 9E16|1|I|C|1271, 9E16|1|I|A|1273
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E16_047 not in the Motif Atlas
- Homologous match to IL_8B0X_100
- Geometric discrepancy: 0.093
- The information below is about IL_8B0X_100
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_57188.6
- Basepair signature
- cWW-tWW-L-tWW-cWW-cSH
- Number of instances in this motif group
- 6
Unit IDs
9E16|1|I|C|1147
9E16|1|I|U|1148
9E16|1|I|A|1149
9E16|1|I|A|1150
9E16|1|I|G|1151
9E16|1|I|U|1152
9E16|1|I|G|1153
*
9E16|1|I|C|1269
9E16|1|I|U|1270
9E16|1|I|C|1271
9E16|1|I|A|1272
9E16|1|I|A|1273
9E16|1|I|G|1274
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
- Chain J
- 50S ribosomal protein L13
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