IL_9E16_054
3D structure
- PDB id
- 9E16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CAGCGAAG*UGGAG
- Length
- 13 nucleotides
- Bulged bases
- 9E16|1|I|C|1342
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E16_054 not in the Motif Atlas
- Homologous match to IL_8B0X_107
- Geometric discrepancy: 0.1349
- The information below is about IL_8B0X_107
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_90775.3
- Basepair signature
- cWW-tSS-tSH-L-tHS-tHS-cWW
- Number of instances in this motif group
- 30
Unit IDs
9E16|1|I|C|1339
9E16|1|I|A|1340
9E16|1|I|G|1341
9E16|1|I|C|1342
9E16|1|I|G|1343
9E16|1|I|A|1344
9E16|1|I|A|1345
9E16|1|I|G|1346
*
9E16|1|I|U|1365
9E16|1|I|G|1366
9E16|1|I|G|1367
9E16|1|I|A|1368
9E16|1|I|G|1369
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain Q
- 50S ribosomal protein L20
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